{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "# Individual based modelling\n", "\n", "Support for modelling alive or active particles, whose properties/state change in time, is being developed. At the current time, only support for modelling particle *mortality* is included. Examples describing how to include these processes in lagrangian experiments are given below. To ensure the workflow is clean and easy to follow, the examples are run in isolation using a sample particle set. Transport processes are not included. However, the same processes can be easily included when doing transport modelling.\n", "Configuration options are specified in the run config file under the secion `BIO_MODEL`.\n", "\n", "